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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | DNA polymerase III complex, | 0.016482733 | GO:0009360 | | alpha-Linolenic_acid_metabolism | 0.023704482 | KEGG | | Fatty_acid_metabolism | 0.023704482 | KEGG | | Terpenoid_backbone_biosynthesis | 0.023704482 | KEGG | | 3-hydroxyacyl-CoA_dehydrogenase_activity | 0.030984022 | GO:0003857 | | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity, | 0.030984022 | GO:0008685 | | peptide-methionine-(S)-S-oxide reductase activity, | 0.030984022 | GO:0008113 | | fatty acid metabolic process, | 0.03922374 | GO:0006631 | | terpenoid biosynthetic process, | 0.03922374 | GO:0016114 | | iron-sulfur cluster assembly, | 0.03922374 | GO:0016226 |
2.Module member annotation
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000016 | protein phosphorylation,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
protein serine/threonine kinase activity,
ATP binding,
RLK-Pelle_LRR-XII-1 (from iTAK)
RLK-Pelle_DLSV (from iTAK)
RLK-Pelle_WAK (from iTAK)
ADP_binding
polysaccharide_binding
transmembrane_transporter_activity
WRKY Transcription_Regulator(from PlantTFDB)
recognition of pollen,
transmembrane transport,
defense response,
RLK-Pelle_L-LEC (from iTAK)
membrane,
integral to membrane,
RLK-Pelle_SD-2b (from iTAK)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
ATPase activity,
substrate-specific transmembrane transporter activity,
RLK-Pelle_LRR-XI-1 (from iTAK)
6-phosphofructokinase complex,
| details | | CFinderM000109 | Glyoxylate_and_dicarboxylate_metabolism
Peroxisome
FMN binding,
Alanine,_aspartate_and_glutamate_metabolism
Glycine,_serine_and_threonine_metabolism
catalytic activity,
| details | | CFinderM000189 | phosphate ion transport,
cellular carbohydrate metabolic process,
malate metabolic process,
L-malate dehydrogenase activity,
inorganic phosphate transmembrane transporter activity,
malate dehydrogenase activity,
Carbon_fixation_in_photosynthetic_organisms
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glyoxylate_and_dicarboxylate_metabolism
| details | | CFinderM000235 | proton-transporting ATP synthase complex, coupling factor F(o),
intracellular,
Photosynthesis
Oxidative_phosphorylation
ATP synthesis coupled proton transport,
hydrogen ion transmembrane transporter activity,
| details | | CFinderM000461 | STE_STE11 (from iTAK)
zinc_ion_transmembrane_transport
cellular component organization,
actin cytoskeleton organization,
| details | | CFinderM000500 | WRKY Transcription_Regulator(from PlantTFDB)
sequence-specific DNA binding,
sequence-specific DNA binding transcription factor activity,
| details | | CFinderM000659 | ATP-dependent peptidase activity,
| details | | CFinderM001342 | | details | | CFinderM001423 | Glycine,_serine_and_threonine_metabolism
intracellular,
Arachidonic_acid_metabolism
glutathione peroxidase activity,
| details | | CFinderM001463 | alpha-Linolenic_acid_metabolism
Fatty_acid_metabolism
GRAS Transcription_Regulator(from PlantTFDB)
fatty acid metabolic process,
3-hydroxyacyl-CoA_dehydrogenase_activity
| details | | CFinderM001495 | integral to Golgi membrane,
intra-Golgi vesicle-mediated transport,
cysteine metabolic process,
STE_STE11 (from iTAK)
Sulfur_relay_system
Thiamine_metabolism
cysteine desulfurase activity,
| details | | CFinderM001509 | Fatty_acid_metabolism
alpha-Linolenic_acid_metabolism
Ribosome
nuclear pore,
fatty acid metabolic process,
translation,
DNA integration,
3-hydroxyacyl-CoA_dehydrogenase_activity
| details | | CFinderM001541 | Terpenoid_backbone_biosynthesis
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
1,3-beta-D-glucan synthase complex,
(1->3)-beta-D-glucan biosynthetic process,
terpenoid biosynthetic process,
iron-sulfur cluster assembly,
| details | | CFinderM001542 | guanyl-nucleotide exchange factor activity,
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,
small GTPase mediated signal transduction,
signal transduction,
terpenoid biosynthetic process,
cellular component organization,
Terpenoid_backbone_biosynthesis
actin cytoskeleton organization,
intracellular,
| details | | CFinderM001642 | cis-Golgi network,
peptide-methionine_(R)-S-oxide_reductase_activity
| details | | CFinderM001663 | DNA polymerase III complex,
GRAS Transcription_Regulator(from PlantTFDB)
DNA_replication
DNA-directed DNA polymerase activity,
| details | | CFinderM001715 | vacuolar proton-transporting V-type ATPase, V1 domain,
RLK-Pelle_RLCK-VIIa-2 (from iTAK)
STE_STE11 (from iTAK)
ATP hydrolysis coupled proton transport,
| details | | CFinderM001881 | cysteine metabolic process,
Sulfur_relay_system
Thiamine_metabolism
cysteine desulfurase activity,
microtubule associated complex,
microtubule-based movement,
| details | | CFinderM001887 | microtubule organizing center,
spindle pole,
nuclear pore,
microtubule cytoskeleton organization,
C2H2 Transcription_Regulator(from PlantTFDB)
RNA_transport
| details |
4.Expression profilings |
