TissueCFM000438's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| eukaryotic translation initiation factor 2 complex | 0.004827128 | GO:0005850 |
| multi-eIF complex | 0.004827128 | GO:0043614 |
| mitochondrial translation | 0.005316398 | GO:0032543 |
| aminoacyl-tRNA hydrolase activity | 0.007798537 | GO:0004045 |
| eukaryotic translation initiation factor 2B complex | 0.00857839 | GO:0005851 |
| ribosome binding | 0.012169917 | GO:0043022 |
| Transcription_related, Transcription factor: HB | 0.013227325 | TF family |
| translational initiation | 0.013515812 | GO:0006413 |
| eukaryotic 48S preinitiation complex | 0.024888615 | GO:0033290 |
| translation initiation factor activity | 0.025214511 | GO:0003743 |
| RNA transport | 0.026828752 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001300 | AT2G44090 (0) | Ankyrin repeat family protein |
| CRO_T007518 | AT5G05470 (2.00E-81) | EIF2 ALPHA|eukaryotic translation initiation factor 2 alpha subunit |
| CRO_T011669 | - | - |
| CRO_T011925 | AT1G18440 (9.00E-85) | Peptidyl-tRNA hydrolase family protein |
| CRO_T017660 | AT3G09670 (6.00E-56) | Tudor/PWWP/MBT superfamily protein |
| CRO_T026820 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000437 | Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase Ubiquitin_Proteasome_system, DUB: USP receptor signaling protein serine/threonine kinase activity single-organism process Transcription_related, Transcription factor: HB chromosome | details |
| TissueCFM000924 | Ubiquitin_Proteasome_system, E3: HECT lateral root formation trichome branching inflorescence morphogenesis response to fungus chromosome organization DNA endoreduplication photomorphogenesis regulation of translational initiation formation of translation preinitiation complex auxin polar transport unidimensional cell growth response to auxin protein ubiquitination involved in ubiquitin-dependent protein catabolic process Cell cycle Viral carcinogenesis chromosome eukaryotic translation initiation factor 3 complex eukaryotic 48S preinitiation complex eukaryotic 43S preinitiation complex | details |
| TissueCFM000995 | Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase trans-Golgi network late endosome to vacuole transport secretion by cell developmental growth early endosome RNA degradation negative regulation of abscisic acid-activated signaling pathway protein phosphorylation | details |
| TissueCFM000997 | eukaryotic translation initiation factor 2 complex multi-eIF complex mitochondrial translation aminoacyl-tRNA hydrolase activity eukaryotic translation initiation factor 2B complex ribosome binding translational initiation eukaryotic 48S preinitiation complex translation initiation factor activity RNA transport Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM000998 | 1,3-β-D-glucan biosynthesis Ubiquitin_Proteasome_system, E3: HECT multi-eIF complex eukaryotic translation initiation factor 2 complex regulation of chlorophyll catabolic process response to toxic substance cellular response to cold secondary growth negative regulation of iron ion transport cellular response to abscisic acid stimulus regulation of meristem development regulation of seed germination Transcription_related, Transcription factor: Orphans regulation of flower development peptidyl-histidine phosphorylation (1->3)-beta-D-glucan biosynthetic process phloem or xylem histogenesis response to osmotic stress eukaryotic translation initiation factor 2B complex 1,3-beta-D-glucan synthase complex signal transduction by protein phosphorylation 1,3-beta-D-glucan synthase activity phosphorelay sensor kinase activity protein histidine kinase binding ribosome binding phosphorelay signal transduction system translational initiation protein ubiquitination involved in ubiquitin-dependent protein catabolic process eukaryotic 48S preinitiation complex identical protein binding | details |
| TissueCFM001530 | nectar secretion sucrose biosynthetic process mitochondrial translation eukaryotic translation initiation factor 2 complex multi-eIF complex sucrose biosynthesis I (from photosynthesis) sucrose biosynthesis II sucrose synthase activity sucrose-phosphate synthase activity aminoacyl-tRNA hydrolase activity eukaryotic translation initiation factor 2B complex ribosome binding translational initiation Ubiquitin_Proteasome_system, E3 adaptor: DWD eukaryotic 48S preinitiation complex translation initiation factor activity RNA degradation RNA transport Starch and sucrose metabolism | details |
| TissueCFM001546 | establishment of planar polarity longitudinal axis specification regulation of vesicle targeting, to, from or within Golgi root hair cell differentiation cell adhesion endosome transport via multivesicular body sorting pathway multi-eIF complex eukaryotic translation initiation factor 2 complex GTP:GDP antiporter activity basipetal auxin transport regulation of ARF protein signal transduction mitochondrial translation cytokinesis by cell plate formation lateral root formation endosome membrane eukaryotic translation initiation factor 2B complex aminoacyl-tRNA hydrolase activity ARF guanyl-nucleotide exchange factor activity phloem or xylem histogenesis Endocytosis unidimensional cell growth poly(A) RNA binding ribosome binding positive regulation of GTPase activity protein transport translational initiation RNA processing eukaryotic 48S preinitiation complex | details |
Expression profiles
 Show details about module gene expression profiling |