TissueCFM000928's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| molybdenum ion binding | 1.33E-05 | GO:0030151 |
| pyridoxal phosphate binding | 0.001491807 | GO:0030170 |
| protein N-linked glycosylation | 0.003189368 | GO:0006487 |
| sucrose metabolic process | 0.003189368 | GO:0005985 |
| catalytic activity | 0.003520549 | GO:0003824 |
| sucrose-phosphate synthase activity | 0.004826058 | GO:0046524 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.007168128 | cazy family |
| Transcription_related, Transcription factor: G2-like | 0.007168128 | TF family |
| sucrose synthase activity | 0.00771827 | GO:0016157 |
| oligosaccharyltransferase complex | 0.007798537 | GO:0008250 |
| sucrose biosynthesis I (from photosynthesis) | 0.007962822 | plantCyc |
| sucrose biosynthesis II | 0.007962822 | plantCyc |
| N-Glycan biosynthesis | 0.027559619 | KEGG pathway |
| Starch and sucrose metabolism | 0.034773441 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006017 | AT1G30910 (5.00E-54) | Molybdenum cofactor sulfurase family protein |
| CRO_T006297 | AT5G06800 (1.00E-20) | myb-like HTH transcriptional regulator family protein |
| CRO_T014467 | AT1G04920 (0) | ATSPS3F|sucrose phosphate synthase 3F |
| CRO_T015255 | AT1G30910 (2.00E-77) | Molybdenum cofactor sulfurase family protein |
| CRO_T016734 | - | - |
| CRO_T027408 | AT4G21150 (1.00E-174) | HAP6|HAPLESS 6; RPN2|RIBOPHORIN II |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000616 | tryptophan synthase activity oxidation-reduction process tryptophan biosynthetic process ethylene biosynthesis I (plants) L-tryptophan biosynthesis flavonoid biosynthesis (in equisetum) pyridoxal phosphate binding Phenylpropanoid biosynthesis | details |
| TissueCFM000769 | histone-arginine N-methyltransferase activity histone arginine methylation [myelin basic protein]-arginine N-methyltransferase activity protein-arginine omega-N monomethyltransferase activity positive regulation of vernalization response peptidyl-arginine methylation, to symmetrical-dimethyl arginine Pentose phosphate pathway protein-arginine omega-N asymmetric methyltransferase activity ribokinase activity peptidyl-arginine methylation, to asymmetrical-dimethyl arginine response to high light intensity response to hydrogen peroxide D-ribose metabolic process protein N-linked glycosylation FoxO signaling pathway regulation of flower development base-excision repair carbohydrate phosphorylation vegetative to reproductive phase transition of meristem DNA recombination | details |
| TissueCFM000845 | glycolytic process glycolysis IV (plant cytosol) glycolysis I (from glucose 6-phosphate) Rubisco shunt Carbon metabolism pyruvate kinase activity magnesium ion binding potassium ion binding gluconeogenesis I phosphopyruvate hydratase activity Transcription_related, Transcription factor: G2-like kinase activity fructose-bisphosphate aldolase activity phosphopyruvate hydratase complex tRNA modification trichome morphogenesis response to cytokinin Calvin-Benson-Bassham cycle sucrose biosynthesis I (from photosynthesis) | details |
| TissueCFM001426 | formation of glycosidic bonds, GlycosylTransferases: GTnc acylglycerol lipase activity phospholipase activity pheophorbide a oxygenase activity sucrose-phosphate synthase activity chlorophyllide a oxygenase [overall] activity RNA polymerase I transcription factor complex sucrose synthase activity cell death protein N-linked glycosylation fruit development sucrose metabolic process defense response to bacterium, incompatible interaction chlorophyll catabolic process oligosaccharyltransferase complex chlorophyll a degradation II phospholipid remodeling (phosphatidylcholine, yeast) sucrose biosynthesis I (from photosynthesis) sucrose biosynthesis II phosphatidylcholine acyl editing phospholipases flower development lipid catabolic process N-Glycan biosynthesis Porphyrin and chlorophyll metabolism 2 iron, 2 sulfur cluster binding | details |
| TissueCFM001492 | [myelin basic protein]-arginine N-methyltransferase activity 3'-5'-exodeoxyribonuclease activity protein-arginine omega-N monomethyltransferase activity nucleotide-excision repair, DNA gap filling DNA replication proofreading base-excision repair, gap-filling delta DNA polymerase complex oligosaccharyltransferase complex protein-arginine omega-N asymmetric methyltransferase activity histone-arginine N-methyltransferase activity peptidyl-arginine methylation, to asymmetrical-dimethyl arginine histone arginine methylation FoxO signaling pathway protein N-linked glycosylation DNA-directed DNA polymerase activity DNA binding DNA recombination DNA biosynthetic process vegetative to reproductive phase transition of meristem DNA replication N-Glycan biosynthesis DNA repair nucleic acid phosphodiester bond hydrolysis | details |
| TissueCFM001535 | oligosaccharyltransferase complex Cytochrome_P450, Cytochrome P450: CYP88A Transcription_related, Transcription factor: G2-like branched-chain amino acid biosynthetic process protein N-linked glycosylation 2-Oxocarboxylic acid metabolism Diterpenoid biosynthesis N-Glycan biosynthesis ethylene biosynthesis I (plants) flavonoid biosynthesis (in equisetum) flavonol biosynthesis GA12 biosynthesis L-valine biosynthesis syringetin biosynthesis tRNA modification negative regulation of catalytic activity acetolactate synthase activity | details |
| TissueCFM001741 | DNA replication proofreading nucleotide-excision repair, DNA gap filling base-excision repair, gap-filling response to high light intensity 3'-5'-exodeoxyribonuclease activity delta DNA polymerase complex oligosaccharyltransferase complex protein N-linked glycosylation response to hydrogen peroxide 5S rRNA binding response to heat DNA biosynthetic process DNA-directed DNA polymerase activity nucleic acid phosphodiester bond hydrolysis | details |
Expression profiles
 Show details about module gene expression profiling |