TissueCFM001052's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| low-affinity nitrate transmembrane transporter activity | 0.001240951 | GO:0080054 |
| phosphate ion binding | 0.001240951 | GO:0042301 |
| Fc gamma R-mediated phagocytosis | 0.001241171 | KEGG pathway |
| low-affinity nitrate transport | 0.003447698 | GO:0080055 |
| protein stabilization | 0.007752508 | GO:0050821 |
| oligopeptide transport | 0.008609317 | GO:0006857 |
| Transcription_related, Transcription factor: ERF | 0.019287112 | TF family |
| Photosynthesis | 0.028320139 | KEGG pathway |
| photosystem II | 0.034422006 | GO:0009523 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002711 | - | - |
| CRO_T003826 | - | - |
| CRO_T003889 | AT1G52190 (9.00E-149) | NPF1.2|NRT1/ PTR family 1.2; NRT1.11|nitrate transporter 1.11 |
| CRO_T016480 | ATCG00710 (1.00E-12) | PSBH|photosystem II reaction center protein H |
| CRO_T019833 | AT4G39780 (9.00E-24) | Integrase-type DNA-binding superfamily protein |
| CRO_T021707 | - | - |
| CRO_T025238 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000074 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM000330 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM000403 | Transcription_related, Transcription factor: AP2 low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport | details |
| TissueCFM000431 | Photosynthesis phosphate ion binding low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport | details |
| TissueCFM000711 | Photosynthesis phosphate ion binding protein stabilization cellular metabolic process Transcription_related, Transcription factor: ERF photosystem II | details |
| TissueCFM001032 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM001111 | low-affinity nitrate transport low-affinity nitrate transmembrane transporter activity oligopeptide transport ATP-dependent helicase activity poly(A) RNA binding RNA processing spliceosomal complex ATP-dependent RNA helicase activity intracellular part | details |
| TissueCFM001153 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM001330 | low-affinity nitrate transport low-affinity nitrate transmembrane transporter activity meristem structural organization phospholipid biosynthetic process Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family oligopeptide transport Glycerophospholipid metabolism carboxy-lyase activity nucleotide binding Transcription_related, Transcription factor: B3 protein autophosphorylation | details |
| TissueCFM001357 | Fc gamma R-mediated phagocytosis | details |
Expression profiles
 Show details about module gene expression profiling |