TissueCFM001032's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| low-affinity nitrate transmembrane transporter activity | 0.000413724 | GO:0080054 |
| low-affinity nitrate transport | 0.001241171 | GO:0080055 |
| oligopeptide transport | 0.004649031 | GO:0006857 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000907 | - | - |
| CRO_T003889 | AT1G52190 (9.00E-149) | NPF1.2|NRT1/ PTR family 1.2; NRT1.11|nitrate transporter 1.11 |
| CRO_T005335 | - | - |
| CRO_T018025 | - | - |
| CRO_T021707 | - | - |
| CRO_T023001 | - | - |
| CRO_T025238 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000074 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM000330 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM000403 | Transcription_related, Transcription factor: AP2 low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport | details |
| TissueCFM000431 | Photosynthesis phosphate ion binding low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport | details |
| TissueCFM001052 | low-affinity nitrate transmembrane transporter activity phosphate ion binding Fc gamma R-mediated phagocytosis low-affinity nitrate transport protein stabilization oligopeptide transport Transcription_related, Transcription factor: ERF Photosynthesis photosystem II | details |
| TissueCFM001108 | 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis Peroxisome | details |
| TissueCFM001111 | low-affinity nitrate transport low-affinity nitrate transmembrane transporter activity oligopeptide transport ATP-dependent helicase activity poly(A) RNA binding RNA processing spliceosomal complex ATP-dependent RNA helicase activity intracellular part | details |
| TissueCFM001153 | low-affinity nitrate transmembrane transporter activity low-affinity nitrate transport oligopeptide transport | details |
| TissueCFM001243 | binding | details |
| TissueCFM001330 | low-affinity nitrate transport low-affinity nitrate transmembrane transporter activity meristem structural organization phospholipid biosynthetic process Protein_kinases_phosphatases, PPC:4.5.4: GSK3/Shaggy Like Protein Kinase Family oligopeptide transport Glycerophospholipid metabolism carboxy-lyase activity nucleotide binding Transcription_related, Transcription factor: B3 protein autophosphorylation | details |
| TissueCFM001357 | Fc gamma R-mediated phagocytosis | details |
Expression profiles
 Show details about module gene expression profiling |