TissueCFM001521's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Inositol phosphate metabolism | 0.010094089 | KEGG pathway |
| 3-phosphoinositide biosynthesis | 0.011136923 | plantCyc |
| D-myo-inositol (1,4,5)-trisphosphate biosynthesis | 0.011136923 | plantCyc |
| Transcription_related, Transcription factor: HSF | 0.013010365 | TF family |
| ureidoglycolate hydrolase activity | 0.02060771 | GO:0004848 |
| 1-phosphatidylinositol-4-phosphate 5-kinase activity | 0.02060771 | GO:0016308 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.022815599 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000747 | AT1G19430 (4.00E-73) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T014842 | AT5G36740 (2.00E-104) | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
| CRO_T017055 | AT1G21980 (0) | ATPIP5K1|phosphatidylinositol-4-phosphate 5-kinase 1 |
| CRO_T017655 | AT2G35820 (1.00E-62) | ureidoglycolate hydrolases |
| CRO_T021320 | AT2G21380 (0) | Kinesin motor family protein |
| CRO_T030194 | AT1G35510 (5.00E-81) | O-fucosyltransferase family protein |
| CRO_T030700 | AT1G32330 (4.00E-100) | ATHSFA1D|heat shock transcription factor A1D |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000326 | Ubiquitin_Proteasome_system, E3 adaptor: DWD protein targeting to peroxisome histone H3-K36 methylation histone H3-K4 methylation negative regulation of flower development 1-phosphatidylinositol-4-phosphate 5-kinase activity 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis phosphatidylinositol phosphorylation Cul4-RING E3 ubiquitin ligase complex spliceosomal complex mRNA splicing, via spliceosome Inositol phosphate metabolism Peroxisome RNA degradation | details |
| TissueCFM000635 | S-methyl-5-thio-α-D-ribose 1-phosphate degradation adenine import across plasma membrane hypoxanthine transport guanine import across plasma membrane uracil import across plasma membrane L-methionine biosynthetic process from S-adenosylmethionine ubiquinone biosynthetic process adenine transmembrane transporter activity uracil transmembrane transporter activity solute:cation symporter activity guanine transmembrane transporter activity L-methionine biosynthetic process from methylthioadenosine Cysteine and methionine metabolism cation transmembrane transport S-methyl-5-thioribose-1-phosphate isomerase activity Ubiquitin_Proteasome_system, DUB: OTU formation of glycosidic bonds, GlycosylTransferases: GTnc microtubule-based movement | details |
| TissueCFM001167 | histone H3-K4 methylation histone H3-K36 methylation negative regulation of flower development Cul4-RING E3 ubiquitin ligase complex RNA degradation | details |
| TissueCFM001374 | Sulfur relay system molybdenum cofactor biosynthesis Transcription_related, Transcription regulator: Jumonji negative regulation of histone acetylation molybdenum incorporation into molybdenum-molybdopterin complex histone H3-K9 demethylation response to brassinosteroid vacuole organization molybdopterin synthase activity early endosome membrane molybdopterin synthase complex Mo-molybdopterin cofactor biosynthetic process protein targeting to vacuole leaf development vegetative to reproductive phase transition of meristem unidimensional cell growth vesicle fusion exocytosis auxin-activated signaling pathway ER to Golgi vesicle-mediated transport SNARE binding SNAP receptor activity | details |
| TissueCFM001388 | 1,3-β-D-glucan biosynthesis Transcription_related, Transcription regulator: SET Proteasome calcium-dependent cysteine-type endopeptidase activity threonine-type endopeptidase activity 1,3-beta-D-glucan synthase activity defense response to fungus, incompatible interaction (1->3)-beta-D-glucan biosynthetic process proteolysis involved in cellular protein catabolic process 1,3-beta-D-glucan synthase complex proteasome core complex | details |
| TissueCFM001443 | 1,3-β-D-glucan biosynthesis Transcription_related, Transcription factor: HSF nuclear envelope reassembly membrane fusion 1,3-beta-D-glucan synthase complex transmembrane receptor protein kinase activity 1,3-beta-D-glucan synthase activity ubiquitin binding Golgi organization (1->3)-beta-D-glucan biosynthetic process | details |
Expression profiles
 Show details about module gene expression profiling |