TissueCFM001791's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: C2C2-YABBY | 3.95E-05 | TF family |
| specification of organ position | 0.009518065 | GO:0010159 |
| abaxial cell fate specification | 0.009518065 | GO:0010158 |
| inflorescence meristem growth | 0.009518065 | GO:0010450 |
| Cytochrome_P450, Cytochrome P450: CYP98A | 0.009552502 | CYP450 family |
| specification of floral organ identity | 0.011894065 | GO:0010093 |
| 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase activity | 0.012410687 | GO:0047083 |
| flavonoid 3'-monooxygenase activity | 0.012410687 | GO:0016711 |
| fruit development | 0.013317417 | GO:0010154 |
| Transcription_related, Transcription factor: NF-YA | 0.014318172 | TF family |
| meristem structural organization | 0.017429172 | GO:0009933 |
| Transcription_related, Transcription regulator: TRAF | 0.017881858 | TF family |
| plastoglobule | 0.022356304 | GO:0010287 |
| regulation of flower development | 0.023067541 | GO:0009909 |
| chlorogenic acid biosynthesis I | 0.025816468 | plantCyc |
| chlorogenic acid biosynthesis II | 0.025816468 | plantCyc |
| Mitophagy - animal | 0.033360366 | KEGG pathway |
| Phenylpropanoid biosynthesis | 0.040125193 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001062 | AT1G03800 (1.00E-20) | ATERF10|RF DOMAIN PROTEIN 10; ERF10|ERF domain protein 10 |
| CRO_T005400 | AT1G33870 (4.00E-36) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T005861 | AT1G64280 (9.00E-157) | ATNPR1|ARABIDOPSIS NONEXPRESSER OF PR GENES 1; NIM1|NON-INDUCIBLE IMMUNITY 1; NPR1|NONEXPRESSER OF PR GENES 1; SAI1|SALICYLIC ACID INSENSITIVE 1 |
| CRO_T007228 | AT2G40890 (0) | CYP98A3|cytochrome P450, family 98, subfamily A, polypeptide 3 |
| CRO_T017125 | AT2G45190 (1.00E-69) | AFO|ABNORMAL FLORAL ORGANS; FIL|FILAMENTOUS FLOWER; YAB1|YABBY1 |
| CRO_T021087 | AT1G29310 (0) | SecY protein transport family protein |
| CRO_T026565 | AT1G30500 (7.00E-19) | NF-YA7|nuclear factor Y, subunit A7 |
| CRO_T026619 | AT4G24690 (4.00E-22) | AtNBR1|next to BRCA1 gene 1 |
| CRO_T029765 | AT2G26580 (2.00E-61) | YAB5|YABBY5 |
| CRO_T031275 | AT1G26090 (8.00E-127) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T032518 | AT2G43540 (2.00E-31) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001012 | Transcription_related, Transcription factor: C2C2-YABBY secondary active sulfate transmembrane transporter activity maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) sulfate transmembrane transport cellular protein metabolic process Cul4-RING E3 ubiquitin ligase complex multicellular organism development small-subunit processome | details |
| TissueCFM001270 | Drug metabolism - cytochrome P450 plastoglobule serine-type endopeptidase inhibitor activity negative regulation of endopeptidase activity response to wounding N,N-dimethylaniline monooxygenase activity ATPase activity NADP binding flavin adenine dinucleotide binding | details |
| TissueCFM001288 | phenylpropanoid biosynthesis, initial reactions Degradation of aromatic compounds Cytochrome_P450, Cytochrome P450: CYP73A trans-cinnamate 4-monooxygenase activity Transcription_related, Transcription regulator: LIM phenylalanine ammonia-lyase activity lignin metabolic process Protein export suberin monomers biosynthesis Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription factor: MYB | details |
| TissueCFM001457 | Drug metabolism - cytochrome P450 sulfate adenylyltransferase (ATP) activity 4-coumarate-CoA ligase activity adenylylsulfate kinase activity sulfate activation for sulfonation sulfate reduction II (assimilatory) phenylpropanoid metabolic process Phenylalanine metabolism Sulfur metabolism N,N-dimethylaniline monooxygenase activity formation of glycosidic bonds, GlycosylTransferases: GTnc 4-hydroxybenzoate biosynthesis I (eukaryotes) umbelliferone biosynthesis Protein export Flavonoid biosynthesis sulfate assimilation suberin monomers biosynthesis NADP binding Phenylpropanoid biosynthesis protein transport | details |
| TissueCFM001493 | Mitophagy - animal Transcription_related, Transcription factor: C2C2-YABBY plastoglobule Ubiquitin_Proteasome_system, E3 adaptor: BTB multicellular organism development | details |
| TissueCFM001585 | Indole alkaloid biosynthesis ajmaline and sarpagine biosynthesis plastoglobule protein dephosphorylation Transcription_related, Transcription factor: MYB | details |
| TissueCFM001592 | Drug metabolism - cytochrome P450 phytate degradation I xylogalacturonan biosynthesis metal ion binding protein kinase activity N,N-dimethylaniline monooxygenase activity Protein export Plant-pathogen interaction | details |
| TissueCFM001835 | Transcription_related, Transcription factor: C2C2-YABBY cellular protein metabolic process multicellular organism development | details |
Expression profiles
 Show details about module gene expression profiling |