TissueCFM001842's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| response to stress | 0.010066142 | GO:0006950 |
| Transcription_related, Transcription factor: NAC | 0.013051924 | TF family |
| Spliceosome | 0.029426413 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009490 | - | - |
| CRO_T015661 | AT3G03270 (0.000000009) | Adenine nucleotide alpha hydrolases-like superfamily protein |
| CRO_T021242 | AT5G09330 (8.00E-35) | ANAC082|NAC domain containing protein 82; VNI1|VND-interacting 1 |
| CRO_T025351 | AT2G01190 (2.00E-91) | PDE331|PIGMENT DEFECTIVE 331 |
| CRO_T025648 | AT4G00467 (4.00E-16) | Calcium-dependent lipid-binding (CaLB domain) family protein |
| CRO_T031123 | AT2G03390 (2.00E-94) | uvrB/uvrC motif-containing protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000378 | indole-3-acetate biosynthesis I Tryptophan metabolism N,N-dimethylaniline monooxygenase activity secondary active sulfate transmembrane transporter activity sulfate transmembrane transport cellular protein metabolic process response to stress NADP binding | details |
| TissueCFM000717 | Transcription_related, Transcription factor: WRKY lipoate biosynthesis and incorporation I Lipoic acid metabolism Tropane, piperidine and pyridine alkaloid biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc polyamine transport microtubule severing protein lipoylation glycolipid metabolic process lipoate biosynthetic process periplasmic space Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase polyamine binding lipoate synthase activity glucosyltransferase activity | details |
| TissueCFM000792 | modulation by symbiont of host calcium or calmodulin-mediated signal transduction detection of calcium ion regulation of calcium or calmodulin-mediated signal transduction in response to host Ras signaling pathway regulation of photomorphogenesis calcium-mediated signaling protein binding 2-alkenal reductase [NAD(P)] activity | details |
| TissueCFM000822 | cysteinyl-tRNA aminoacylation tRNA wobble position uridine thiolation regulation of programmed cell death cristae formation sulfurtransferase activity cysteine-tRNA ligase activity L-alanine biosynthesis III molybdenum cofactor biosynthesis polar nucleus fusion Aminoacyl-tRNA biosynthesis methyltransferase activity | details |
| TissueCFM001263 | 5-deoxystrigol biosynthesis sulfur compound metabolic process purine ribonucleotide metabolic process adenylylsulfatase activity drug transmembrane transport | details |
| TissueCFM001294 | CO2 fixation into oxaloacetate (anaplerotic) Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase cytoplasm L-glutamine biosynthesis III phosphoenolpyruvate carboxylase activity glutathione binding diphosphate-fructose-6-phosphate 1-phosphotransferase activity glycolysis IV (plant cytosol) 6-phosphofructokinase activity translational elongation peptidyl-serine phosphorylation carbon fixation tricarboxylic acid cycle auxin-activated signaling pathway leaf development protein autophosphorylation carbohydrate phosphorylation abscisic acid-activated signaling pathway glutathione metabolic process glycolytic process through fructose-6-phosphate Glutathione metabolism Glycolysis / Gluconeogenesis glutathione transferase activity nucleotidyltransferase activity calmodulin-dependent protein kinase activity calcium-dependent protein serine/threonine kinase activity translation elongation factor activity stromule intracellular signal transduction | details |
| TissueCFM001478 | rRNA (adenine-N6,N6-)-dimethyltransferase activity L-serine biosynthesis damaged DNA binding oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor nucleotide-excision repair rRNA methylation photorespiration response to cold NAD binding very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II proteasome-mediated ubiquitin-dependent protein catabolic process response to stress Fatty acid metabolism | details |
| TissueCFM001812 | translational elongation cell part | details |
| TissueCFM001815 | modulation by symbiont of host calcium or calmodulin-mediated signal transduction detection of calcium ion regulation of calcium or calmodulin-mediated signal transduction in response to host Ras signaling pathway regulation of photomorphogenesis Transcription_related, Transcription regulator: GNAT calcium-mediated signaling | details |
| TissueCFM001823 | fructose 1,6-bisphosphate 1-phosphatase activity Transcription_related, Transcription factor: NAC Calvin-Benson-Bassham cycle gluconeogenesis I glycolysis I (from glucose 6-phosphate) sucrose biosynthesis I (from photosynthesis) very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II Fatty acid metabolism dephosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |