TreatCFM000243's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| DNA binding | 0.00744085 | GO:0003677 |
| Transcription_related, Transcription regulator: HMG | 0.025581215 | TF family |
| Transcription_related, Transcription factor: B3 | 0.049981766 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001059 | - | - |
| CRO_T002582 | - | - |
| CRO_T010586 | AT5G52120 (4.00E-20) | AtPP2-A14|phloem protein 2-A14 |
| CRO_T011354 | AT1G57680 (7.00E-09) | Cand1|candidate G-protein Coupled Receptor 1 |
| CRO_T014807 | AT3G10860 (5.00E-22) | Cytochrome b-c1 complex, subunit 8 protein |
| CRO_T017237 | AT1G29260 (3.00E-12) | ATPEX7|ARABIDOPSIS PEROXIN 7; PEX7|peroxin 7 |
| CRO_T027935 | AT3G09250 (3.00E-48) | Nuclear transport factor 2 (NTF2) family protein |
| CRO_T028196 | AT4G35570 (5.00E-12) | HMGB5|high mobility group B5; NFD5|NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000061 | ATPase activity, coupled to transmembrane movement of substances organic substance transport single-organism transport lipid transport hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Protein_kinases_phosphatases, PPC:1.13.3: Leucine Rich Repeat Kinase III beta-galactosidase activity Transcription_related, Transcription factor: B3 | details |
| TreatCFM000249 | Antigen processing and presentation ATPase activity, coupled to transmembrane movement of substances hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: NF-YB organic substance transport photosynthetic acclimation regulation of vesicle fusion single-organism transport activation of GTPase activity lipid transport Transcription_related, Transcription factor: NAC regulation of transcription, DNA-templated | details |
| TreatCFM000327 | nucleoside metabolic process quercetin 7-O-glucosyltransferase activity quercetin 3-O-glucosyltransferase activity dTDP biosynthetic process flavonoid biosynthetic process dTTP biosynthetic process dUDP biosynthetic process flavonoid glucuronidation thymidylate kinase activity catalytic activity uridylate kinase activity apigeninidin 5-O-glucoside biosynthesis luteolinidin 5-O-glucoside biosynthesis Pyrimidine metabolism intracellular membrane-bounded organelle integral component of membrane pyrimidine deoxyribonucleotide phosphorylation pyrimidine deoxyribonucleotides de novo biosynthesis II superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli) formation of glycosidic bonds, GlycosylTransferases: GTnc pyrimidine deoxyribonucleotides de novo biosynthesis I cytokinin-O-glucosides biosynthesis chloroplast outer membrane chloroplast organization | details |
| TreatCFM000698 | oxo-acid-lyase activity 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity omega peptidase activity imidazoleglycerol-phosphate synthase activity Ubiquitin_Proteasome_system, DUB: Josephin L-glutamine degradation I L-histidine biosynthesis thiol-dependent ubiquitin-specific protease activity transferase activity, transferring hexosyl groups histidine biosynthetic process protein deubiquitination Biosynthesis of amino acids | details |
| TreatCFM000823 | 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity 3-oxo-5-alpha-steroid 4-dehydrogenase activity progesterone 5-alpha-reductase activity sterol 5-alpha reductase activity brassinosteroid biosynthesis I brassinosteroid biosynthesis II Brassinosteroid biosynthesis Transcription_related, Transcription regulator: HMG 3'-phospho-5'-adenylyl sulfate transmembrane transport Plant-pathogen interaction integral component of endoplasmic reticulum membrane integral component of Golgi membrane polysaccharide catabolic process Transcription_related, Transcription factor: B3 | details |
| TreatCFM001170 | pollen tube tip actin cytoskeleton organization pollen tube growth transferase activity, transferring hexosyl groups Transcription_related, Transcription regulator: HMG Transcription_related, Transcription factor: B3 | details |
| TreatCFM001525 | anthocyanidin modification (Arabidopsis) anthocyanin biosynthesis anthocyanin biosynthesis (delphinidin 3-O-glucoside) anthocyanin biosynthesis (pelargonidin 3-O-glucoside) cellulose biosynthesis quercetin glucoside biosynthesis (Allium) quercetin gentiotetraside biosynthesis plant-type secondary cell wall biogenesis microtubule cytoskeleton organization cytokinesis response to osmotic stress defense response to fungus cellulose biosynthetic process response to water deprivation defense response to bacterium multicellular organism development formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) | details |
Expression profiles
 Show details about module gene expression profiling |