TreatCFM000541's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.002659181 | cazy family |
| protein N-glycosylation (eukaryotic, high mannose) | 0.004071992 | plantCyc |
| ribosomal small subunit assembly | 0.010094442 | GO:0000028 |
| mRNA binding | 0.024325452 | GO:0003729 |
| transferase activity, transferring hexosyl groups | 0.024325452 | GO:0016758 |
| N-Glycan biosynthesis | 0.027559619 | KEGG pathway |
| rRNA binding | 0.038690738 | GO:0019843 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005546 | - | - |
| CRO_T007544 | - | - |
| CRO_T008422 | - | - |
| CRO_T011527 | ATCG00900 (7.00E-33) | RPS7|CHLOROPLAST RIBOSOMAL PROTEIN S7 |
| CRO_T015186 | AT5G38460 (6.00E-62) | ALG6, ALG8 glycosyltransferase family |
| CRO_T029682 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000084 | formation of glycosidic bonds, GlycosylTransferases: GTnc protein N-glycosylation (eukaryotic, high mannose) C-19 gibberellin 2-beta-dioxygenase activity gibberellin catabolic process aspartyl esterase activity pectinesterase activity pectinesterase inhibitor activity transferase activity, transferring hexosyl groups Diterpenoid biosynthesis N-Glycan biosynthesis cell wall modification pectin catabolic process response to light stimulus negative regulation of catalytic activity Pentose and glucuronate interconversions | details |
| TreatCFM000139 | formation of glycosidic bonds, GlycosylTransferases: GTnc regulation of embryonic development protein N-glycosylation (eukaryotic, high mannose) glycyl-tRNA aminoacylation glycine-tRNA ligase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds nitrogen compound metabolic process Aminoacyl-tRNA biosynthesis N-Glycan biosynthesis transferase activity, transferring hexosyl groups small GTPase mediated signal transduction embryo development ending in seed dormancy transferase activity, transferring acyl groups | details |
| TreatCFM000214 | tubulin binding formation of glycosidic bonds, GlycosylTransferases: GTnc lipid IVA biosynthesis Lipopolysaccharide biosynthesis organophosphate metabolic process carbohydrate derivative metabolic process protein N-glycosylation (eukaryotic, high mannose) tubulin complex assembly cullin deneddylation | details |
| TreatCFM000257 | formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds protein N-glycosylation (eukaryotic, high mannose) gene silencing by RNA nitrogen compound metabolic process N-Glycan biosynthesis transferase activity, transferring hexosyl groups transferase activity, transferring acyl groups | details |
| TreatCFM000381 | 9-cis-epoxycarotenoid dioxygenase activity lipid transporter activity protein N-glycosylation (eukaryotic, high mannose) formation of glycosidic bonds, GlycosylTransferases: GTnc lipid transport | details |
| TreatCFM000394 | protein N-glycosylation (eukaryotic, high mannose) adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 formation of glycosidic bonds, GlycosylTransferases: GTnc hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Toll and Imd signaling pathway root epidermal cell differentiation regulation of salicylic acid metabolic process cell wall macromolecule catabolic process glutaminyl-tRNAGln biosynthesis via transamidation postreplication repair protein K63-linked ubiquitination glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity DNA topoisomerase activity mitochondrial translation response to nitrate Ubiquitin_Proteasome_system, E2: UBC chitin catabolic process multidimensional cell growth glutamyl-tRNA(Gln) amidotransferase complex Aminoacyl-tRNA biosynthesis Homologous recombination N-Glycan biosynthesis response to heat chitinase activity response to water deprivation response to cytokinin cellulose biosynthetic process response to salt stress ubiquitin protein ligase binding transferase activity, transferring hexosyl groups | details |
| TreatCFM000425 | formation of glycosidic bonds, GlycosylTransferases: GTnc protein N-glycosylation (eukaryotic, high mannose) N-Glycan biosynthesis small GTPase mediated signal transduction transferase activity, transferring hexosyl groups GTP binding | details |
| TreatCFM000483 | formation of glycosidic bonds, GlycosylTransferases: GTnc protein N-glycosylation (eukaryotic, high mannose) N-Glycan biosynthesis transferase activity, transferring hexosyl groups | details |
| TreatCFM000550 | formation of glycosidic bonds, GlycosylTransferases: GTnc protein N-glycosylation (eukaryotic, high mannose) transferase activity, transferring hexosyl groups N-Glycan biosynthesis | details |
| TreatCFM001186 | formation of glycosidic bonds, GlycosylTransferases: GTnc Various types of N-glycan biosynthesis Lewis a epitope biosynthetic process L-methionine biosynthetic process from S-adenosylmethionine fucosylation S-methyl-5-thio-α-D-ribose 1-phosphate degradation adenosine ribonucleotides de novo biosynthesis L-methionine biosynthetic process from methylthioadenosine fucosyltransferase activity ribosomal small subunit assembly S-methyl-5-thioribose-1-phosphate isomerase activity plant-type vacuole Golgi cisterna membrane protein glycosylation Ubiquitin_Proteasome_system, E3: U-box Cysteine and methionine metabolism | details |
Expression profiles
 Show details about module gene expression profiling |