TreatCFM001035's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Peroxisome | 0.011991921 | KEGG pathway |
| thioredoxin pathway | 0.015920713 | plantCyc |
| sesamin biosynthesis | 0.016408706 | plantCyc |
| Cytochrome_P450, Cytochrome P450: CYP81D | 0.020641315 | CYP450 family |
| Protein_kinases_phosphatases, PPC:1.3.2: Leucine Rich Repeat Receptor VIII | 0.020641315 | kinase family |
| cytoskeletal part | 0.035340409 | GO:0044430 |
| microtubule cytoskeleton | 0.035340409 | GO:0015630 |
| steroid metabolic process | 0.043964979 | GO:0008202 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002331 | AT1G32160 (3.00E-87) | Protein of unknown function (DUF760) |
| CRO_T003370 | - | - |
| CRO_T006413 | AT1G03780 (6.00E-110) | TPX2|targeting protein for XKLP2 |
| CRO_T008510 | AT4G37370 (3.00E-157) | CYP81D8|cytochrome P450, family 81, subfamily D, polypeptide 8 |
| CRO_T011696 | AT3G55730 (2.00E-41) | AtMYB109|myb domain protein 109 |
| CRO_T013385 | AT2G42770 (5.00E-75) | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| CRO_T014634 | AT1G15000 (1.00E-21) | scpl50|serine carboxypeptidase-like 50 |
| CRO_T015530 | AT1G04010 (6.00E-98) | ERP1|enhanced response to Phytophthora 1; PSAT1|phospholipid sterol acyl transferase 1 |
| CRO_T015650 | AT4G04950 (1.00E-21) | AtGRXS17|monothiol glutaredoxin 17 |
| CRO_T021645 | AT1G65680 (5.00E-23) | ATEXPB2|expansin B2 |
| CRO_T031316 | AT3G21690 (0) | MATE efflux family protein |
| CRO_T032155 | AT1G06840 (2.00E-132) | Leucine-rich repeat protein kinase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000523 | serine-type carboxypeptidase activity proteolysis involved in cellular protein catabolic process jasmonate-amino synthetase activity induced systemic resistance, jasmonic acid mediated signaling pathway jasmonic acid metabolic process seed development response to wounding protein storage vacuole triacylglycerol degradation lyase activity Glycerolipid metabolism Plant hormone signal transduction | details |
| TreatCFM000850 | Cytochrome_P450, Cytochrome P450: CYP83B hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Cytochrome_P450, Cytochrome P450: CYP81D ternatin C3 biosynthesis Galactose metabolism secondary metabolic process defense response to other organism phosphate-containing compound metabolic process indole glucosinolate metabolic process secologanin and strictosidine biosynthesis sesamin biosynthesis vindoline and vinblastine biosynthesis | details |
| TreatCFM001103 | adenine and adenosine salvage II Transcription_related, Transcription factor: OFP phospholipase activity adenine phosphoribosyltransferase activity acylglycerol lipase activity adenine salvage microtubule cytoskeleton cytoskeletal part nucleoside metabolic process lipid catabolic process FMN binding cytoplasm antiporter activity drug transmembrane transporter activity regulation of cellular process drug transmembrane transport | details |
| TreatCFM001188 | Cell cycle - yeast MAPK signaling pathway mitotic chromosome condensation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc microtubule cytoskeleton cytoskeletal part protein disulfide isomerase activity cell regulation of cellular process cell redox homeostasis cell division polysaccharide binding | details |
| TreatCFM001517 | Plant-pathogen interaction Cytochrome_P450, Cytochrome P450: CYP81K folate polyglutamylation II glutamate removal from folates UDP-D-galactose biosynthesis UDP-L-arabinose biosynthesis I (from UDP-xylose) peptide-methionine (S)-S-oxide reductase activity gamma-glutamyl-peptidase activity Cytochrome_P450, Cytochrome P450: CYP81D UDP-glucose 4-epimerase activity D-galactose degradation III Cell cycle - yeast Folate biosynthesis tetrahydrofolylpolyglutamate metabolic process chromosome condensation condensed chromosome microtubule cytoskeleton cytoskeletal part UDP-sugars interconversion stachyose degradation Galactose metabolism ADP binding sesamin biosynthesis protein repair indole glucosinolate metabolic process defense response to other organism mitotic nuclear division galactose metabolic process glutamine metabolic process | details |
| TreatCFM001659 | condensed chromosome chromosome condensation Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX Transcription_related, Transcription regulator: AUX/IAA Cell cycle - yeast adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 DNA replication DNA recombination protein phosphorylation mitotic nuclear division DNA repair drug transmembrane transport regulation of cellular process | details |
| TreatCFM001944 | fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) fatty acid beta-oxidation using acyl-CoA dehydrogenase lipid homeostasis acyl-CoA dehydrogenase activity acyl-CoA oxidase activity oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor fatty-acyl-CoA binding jasmonic acid biosynthesis cell wall organization or biogenesis O-acetyltransferase activity Fatty acid metabolism Peroxisome Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TreatCFM002129 | cell cell redox homeostasis microtubule cytoskeleton cytoskeletal part thioredoxin pathway MAPK signaling pathway Stilbenoid, diarylheptanoid and gingerol biosynthesis vindoline and vinblastine biosynthesis 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity protein disulfide isomerase activity myricetin 3'-O-methyltransferase activity aromatic compound biosynthetic process alkaloid biosynthetic process regulation of cellular process protein disulfide oxidoreductase activity protein homodimerization activity electron carrier activity | details |
Expression profiles
 Show details about module gene expression profiling |