TreatCFM001103's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| adenine and adenosine salvage II | 0.001890052 | plantCyc |
| Transcription_related, Transcription factor: OFP | 0.003776977 | TF family |
| phospholipase activity | 0.010006496 | GO:0004620 |
| adenine phosphoribosyltransferase activity | 0.010006496 | GO:0003999 |
| acylglycerol lipase activity | 0.010006496 | GO:0047372 |
| adenine salvage | 0.010424299 | GO:0006168 |
| microtubule cytoskeleton | 0.014830334 | GO:0015630 |
| cytoskeletal part | 0.014830334 | GO:0044430 |
| nucleoside metabolic process | 0.017361257 | GO:0009116 |
| lipid catabolic process | 0.02773782 | GO:0016042 |
| FMN binding | 0.034219398 | GO:0010181 |
| cytoplasm | 0.040894774 | GO:0005737 |
| antiporter activity | 0.046180961 | GO:0015297 |
| drug transmembrane transporter activity | 0.046180961 | GO:0015238 |
| regulation of cellular process | 0.046940296 | GO:0050794 |
| drug transmembrane transport | 0.046940296 | GO:0006855 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000291 | AT4G12440 (1.00E-63) | APT4|adenine phosphoribosyl transferase 4 |
| CRO_T002331 | AT1G32160 (3.00E-87) | Protein of unknown function (DUF760) |
| CRO_T006413 | AT1G03780 (6.00E-110) | TPX2|targeting protein for XKLP2 |
| CRO_T007836 | AT2G26560 (1.00E-142) | PLA IIA|PHOSPHOLIPASE A 2A; PLP2|PATATIN-LIKE PROTEIN 2 |
| CRO_T011901 | AT5G19650 (1.00E-20) | OFP8|ovate family protein 8 |
| CRO_T015296 | AT4G33540 (7.00E-86) | metallo-beta-lactamase family protein |
| CRO_T019376 | AT3G14130 (5.00E-79) | HAOX1|Aldolase-type TIM barrel family protein |
| CRO_T031316 | AT3G21690 (0) | MATE efflux family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001035 | Peroxisome thioredoxin pathway sesamin biosynthesis Cytochrome_P450, Cytochrome P450: CYP81D Protein_kinases_phosphatases, PPC:1.3.2: Leucine Rich Repeat Receptor VIII cytoskeletal part microtubule cytoskeleton steroid metabolic process | details |
| TreatCFM001188 | Cell cycle - yeast MAPK signaling pathway mitotic chromosome condensation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc microtubule cytoskeleton cytoskeletal part protein disulfide isomerase activity cell regulation of cellular process cell redox homeostasis cell division polysaccharide binding | details |
| TreatCFM001517 | Plant-pathogen interaction Cytochrome_P450, Cytochrome P450: CYP81K folate polyglutamylation II glutamate removal from folates UDP-D-galactose biosynthesis UDP-L-arabinose biosynthesis I (from UDP-xylose) peptide-methionine (S)-S-oxide reductase activity gamma-glutamyl-peptidase activity Cytochrome_P450, Cytochrome P450: CYP81D UDP-glucose 4-epimerase activity D-galactose degradation III Cell cycle - yeast Folate biosynthesis tetrahydrofolylpolyglutamate metabolic process chromosome condensation condensed chromosome microtubule cytoskeleton cytoskeletal part UDP-sugars interconversion stachyose degradation Galactose metabolism ADP binding sesamin biosynthesis protein repair indole glucosinolate metabolic process defense response to other organism mitotic nuclear division galactose metabolic process glutamine metabolic process | details |
| TreatCFM001659 | condensed chromosome chromosome condensation Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX Transcription_related, Transcription regulator: AUX/IAA Cell cycle - yeast adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 DNA replication DNA recombination protein phosphorylation mitotic nuclear division DNA repair drug transmembrane transport regulation of cellular process | details |
| TreatCFM002064 | L-homoserine biosynthesis L-lysine biosynthesis VI CAF-1 complex 2-Oxocarboxylic acid metabolism tissue development phosphorylation aspartate kinase activity nucleosome assembly DNA recombination cellular amino acid biosynthetic process histone binding Ubiquitin_Proteasome_system, E3 adaptor: DWD plastoglobule | details |
| TreatCFM002067 | 4-amino-4-deoxychorismate synthase activity oxo-acid-lyase activity 4-coumarate-CoA ligase activity Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc tetrahydrofolate biosynthetic process carboxylic acid metabolic process Folate biosynthesis Phenylalanine metabolism glycosyl compound metabolic process 4-aminobenzoate biosynthesis coumarin biosynthesis (via 2-coumarate) 4-hydroxybenzoate biosynthesis I (eukaryotes) umbelliferone biosynthesis beta-glucosidase activity plastid tetrahydrofolate biosynthesis II Flavonoid biosynthesis peptidase activity suberin monomers biosynthesis Phenylpropanoid biosynthesis Starch and sucrose metabolism | details |
| TreatCFM002129 | cell cell redox homeostasis microtubule cytoskeleton cytoskeletal part thioredoxin pathway MAPK signaling pathway Stilbenoid, diarylheptanoid and gingerol biosynthesis vindoline and vinblastine biosynthesis 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity protein disulfide isomerase activity myricetin 3'-O-methyltransferase activity aromatic compound biosynthetic process alkaloid biosynthetic process regulation of cellular process protein disulfide oxidoreductase activity protein homodimerization activity electron carrier activity | details |
Expression profiles
 Show details about module gene expression profiling |