TreatCFM002081's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.036841041 | ubs family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001708 | AT4G18750 (3.00E-107) | DOT4|DEFECTIVELY ORGANIZED TRIBUTARIES 4 |
| CRO_T004491 | AT1G09320 (1.00E-22) | agenet domain-containing protein |
| CRO_T018378 | AT2G17110 (1.00E-54) | Protein of unknown function (DUF630 and DUF632) |
| CRO_T023637 | AT2G39970 (1.00E-13) | APEM3|ABERRANT PEROXISOME MORPHOLOGY 3; PMP38|peroxisomal membrane protein 38; PXN|peroxisomal NAD carrier |
| CRO_T025684 | - | - |
| CRO_T030550 | AT3G58090 (3.00E-27) | Disease resistance-responsive (dirigent-like protein) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001517 | Plant-pathogen interaction Cytochrome_P450, Cytochrome P450: CYP81K folate polyglutamylation II glutamate removal from folates UDP-D-galactose biosynthesis UDP-L-arabinose biosynthesis I (from UDP-xylose) peptide-methionine (S)-S-oxide reductase activity gamma-glutamyl-peptidase activity Cytochrome_P450, Cytochrome P450: CYP81D UDP-glucose 4-epimerase activity D-galactose degradation III Cell cycle - yeast Folate biosynthesis tetrahydrofolylpolyglutamate metabolic process chromosome condensation condensed chromosome microtubule cytoskeleton cytoskeletal part UDP-sugars interconversion stachyose degradation Galactose metabolism ADP binding sesamin biosynthesis protein repair indole glucosinolate metabolic process defense response to other organism mitotic nuclear division galactose metabolic process glutamine metabolic process | details |
| TreatCFM001518 | Cytochrome_P450, Cytochrome P450: CYP81K Transcription_related, Transcription factor: STAT UDP-D-galactose biosynthesis UDP-L-arabinose biosynthesis I (from UDP-xylose) Cytochrome_P450, Cytochrome P450: CYP81D D-galactose degradation III stachyose degradation UDP-sugars interconversion sesamin biosynthesis Galactose metabolism box C/D snoRNP complex indole glucosinolate metabolic process defense response to other organism rRNA modification galactose metabolic process Ribosome biogenesis in eukaryotes organic substance metabolic process cellular metabolic process UDP-glucose 4-epimerase activity signal transducer activity snoRNA binding secondary metabolite biosynthetic process signal transduction | details |
| TreatCFM001571 | rRNA modification box C/D snoRNP complex snoRNA binding Ribosome biogenesis in eukaryotes small-subunit processome UDP-D-galactose biosynthesis UDP-L-arabinose biosynthesis I (from UDP-xylose) D-galactose degradation III UDP-glucose 4-epimerase activity Galactose metabolism stachyose degradation UDP-sugars interconversion galactose metabolic process organic substance metabolic process cellular metabolic process transmembrane transporter activity Ubiquitin_Proteasome_system, E3 adaptor: F-box | details |
| TreatCFM001659 | condensed chromosome chromosome condensation Protein_kinases_phosphatases, PPC:1.4.1: Crinkly 4 Like Kinase Protein_kinases_phosphatases, PPC:1.6.1: Leucine Rich Repeat Kinase IX Transcription_related, Transcription regulator: AUX/IAA Cell cycle - yeast adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 DNA replication DNA recombination protein phosphorylation mitotic nuclear division DNA repair drug transmembrane transport regulation of cellular process | details |
| TreatCFM001777 | Betalain biosynthesis intralumenal vesicle formation protein import into chloroplast stroma cellular aromatic compound metabolic process choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases oxidoreductase activity, acting on single donors with incorporation of molecular oxygen UDP-glycosyltransferase activity | details |
| TreatCFM001986 | L-alanine biosynthesis III molybdenum cofactor biosynthesis tRNA wobble position uridine thiolation chromosome condensation protein targeting to chloroplast Cell cycle - yeast Fanconi anemia pathway sulfurtransferase activity hydrolase activity, acting on acid anhydrides condensed chromosome mitotic nuclear division zinc II ion transmembrane transport | details |
| TreatCFM002010 | Transcription_related, Transcription factor: ERF | details |
| TreatCFM002032 | sucrose metabolic process formation of glycosidic bonds, GlycosylTransferases: GTnc glutamine N-phenylacetyltransferase activity glycogen (starch) synthase activity starch binding sucrose-phosphate synthase activity sucrose synthase activity starch biosynthesis sucrose biosynthesis I (from photosynthesis) sucrose biosynthesis II Plant-pathogen interaction Starch and sucrose metabolism | details |
| TreatCFM002064 | L-homoserine biosynthesis L-lysine biosynthesis VI CAF-1 complex 2-Oxocarboxylic acid metabolism tissue development phosphorylation aspartate kinase activity nucleosome assembly DNA recombination cellular amino acid biosynthetic process histone binding Ubiquitin_Proteasome_system, E3 adaptor: DWD plastoglobule | details |
Expression profiles
 Show details about module gene expression profiling |