TissueCFM001571's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Hsp70 protein binding | 0.007509087 | GO:0030544 |
| heat acclimation | 0.011400686 | GO:0010286 |
| protein oligomerization | 0.011400686 | GO:0051259 |
| receptor recycling | 0.011400686 | GO:0001881 |
| retromer complex | 0.015193569 | GO:0030904 |
| multivesicular body | 0.015193569 | GO:0005771 |
| Transcription_related, Transcription factor: G2-like | 0.016718717 | TF family |
| Transcription_related, Transcription factor: FAR1 | 0.024040353 | TF family |
| retrograde transport, endosome to Golgi | 0.027735022 | GO:0042147 |
| sulfate assimilation | 0.027735022 | GO:0000103 |
| regulation of transcription, DNA-templated | 0.027735022 | GO:0006355 |
| protein targeting to vacuole | 0.027735022 | GO:0006623 |
| cellular response to oxidative stress | 0.027735022 | GO:0034599 |
| oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 0.04683619 | GO:0016671 |
| protein disulfide oxidoreductase activity | 0.047662945 | GO:0015035 |
| protein transporter activity | 0.047662945 | GO:0008565 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007378 | AT3G47810 (1.00E-92) | MAG1|MAIGO 1; VPS29|VACUOLAR PROTEIN SORTING 29 |
| CRO_T014825 | AT3G56420 (1.00E-20) | Thioredoxin superfamily protein |
| CRO_T021484 | AT3G16857 (1.00E-20) | ARR1|response regulator 1 |
| CRO_T027135 | AT1G76320 (9.00E-21) | CPD25|CHLOROPLAST DIVISION MUTANT 25; FRS4|FAR1-related sequence 4 |
| CRO_T027294 | AT4G38930 (5.00E-102) | Ubiquitin fusion degradation UFD1 family protein |
| CRO_T028287 | AT1G21320 (4.00E-13) | nucleotide binding; nucleic acid binding |
| CRO_T033787 | AT1G55340 (1.00E-44) | Protein of unknown function (DUF1639) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000554 | molybdenum cofactor biosynthesis Transcriptional misregulation in cancers nucleic acid binding nucleotide binding carbohydrate metabolic process | details |
| TissueCFM000674 | cortical microtubule organization chaperone-mediated protein complex assembly prefoldin complex mRNA surveillance pathway translational initiation chaperone binding protein folding | details |
| TissueCFM000675 | nucleic acid binding histidine phosphotransfer kinase activity nucleotide binding protein histidine kinase binding Transcriptional misregulation in cancers cytokinin-activated signaling pathway phosphorelay signal transduction system mRNA surveillance pathway | details |
| TissueCFM000950 | cellulose synthase (UDP-forming) activity cellulose biosynthetic process cell wall organization N-Glycan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.9.3: Putative receptor like protein kinase Ubiquitin_Proteasome_system, E3: RING | details |
| TissueCFM001002 | Transcription_related, Transcription factor: G2-like SNARE complex disassembly soluble NSF attachment protein activity syntaxin binding membrane fusion Autophagy - yeast MAPK signaling pathway Proteasome maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | details |
| TissueCFM001338 | Betalain biosynthesis Tyrosine metabolism inosine nucleosidase activity oxidoreductase activity, acting on single donors with incorporation of molecular oxygen cellular aromatic compound metabolic process negative regulation of endopeptidase activity inosine catabolic process adenine and adenosine salvage II guanosine nucleotides degradation I pyrimidine ribonucleosides salvage II pyrimidine salvage pathway thioredoxin pathway cysteine-type endopeptidase inhibitor activity ferrous iron binding adenosine nucleotides degradation I UDP-glucosyltransferase activity protein disulfide oxidoreductase activity | details |
| TissueCFM001458 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity cytoskeleton organization gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) Rubisco shunt microtubule binding | details |
| TissueCFM001635 | iron-sulfur cluster assembly negative regulation of apoptotic process mitochondrial intermembrane space Transcription_related, Transcription factor: FAR1 | details |
| TissueCFM001708 | inosine nucleosidase activity protein targeting to ER inosine catabolic process signal peptidase complex adenine and adenosine salvage II guanosine nucleotides degradation I pyrimidine ribonucleosides salvage II pyrimidine salvage pathway signal peptide processing adenosine nucleotides degradation I DNA replication Protein export DNA recombination UDP-glucosyltransferase activity DNA repair peptidase activity | details |
| TissueCFM001799 | mitochondrial outer membrane translocase complex protein import into mitochondrial outer membrane Ubiquitin_Proteasome_system, DUB: USP Transcription_related, Transcription factor: FAR1 cysteine-type peptidase activity cellular protein metabolic process small GTPase mediated signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |