TreatCFM000587's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:1.17.1: Wall Associated Kinase | 0.001447391 | kinase family |
| cell surface receptor signaling pathway | 0.003924457 | GO:0007166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013683 | - | - |
| CRO_T014058 | AT3G46710 (4.00E-28) | NB-ARC domain-containing disease resistance protein |
| CRO_T015915 | AT2G36835 (8.00E-14) | unknown protein |
| CRO_T017252 | - | - |
| CRO_T027104 | - | - |
| CRO_T030526 | AT3G58010 (1.00E-81) | PGL34|plastoglobulin 34kD |
| CRO_T031889 | AT1G21270 (1.00E-150) | WAK2|wall-associated kinase 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000080 | negative regulation of protein kinase activity protein kinase inhibitor activity double-stranded RNA binding protein kinase binding | details |
| TreatCFM000089 | ABC transporters photosystem II reaction center | details |
| TreatCFM000156 | plastid organization redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 isoflavonoid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) | details |
| TreatCFM000266 | outer membrane | details |
| TreatCFM000371 | response to biotic stimulus defense response redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 L-aspartate biosynthesis L-aspartate degradation I superpathway of L-isoleucine biosynthesis I superpathway of L-threonine biosynthesis UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UDP-D-xylose biosynthesis superpathway of aspartate and asparagine biosynthesis UDP-sugars interconversion regulation of protein serine/threonine phosphatase activity acetaldehyde biosynthesis I pyruvate fermentation to ethanol II alcohol dehydrogenase (NAD) activity UDP-glucose 6-dehydrogenase activity receptor activity L-aspartate:2-oxoglutarate aminotransferase activity S-(hydroxymethyl)glutathione dehydrogenase activity protein phosphatase inhibitor activity abscisic acid binding | details |
| TreatCFM000440 | isoflavonoid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) hydrogen-translocating pyrophosphatase activity inorganic diphosphatase activity transmembrane transport | details |
| TreatCFM000874 | Protein_kinases_phosphatases, PPC:1.17.1: Wall Associated Kinase redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 cell surface receptor signaling pathway | details |
| TreatCFM000895 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor chaperone binding brassinosteroids inactivation secologanin and strictosidine biosynthesis Phenylpropanoid biosynthesis | details |
| TreatCFM001111 | Pyrimidine metabolism uridylate kinase activity cytidylate kinase activity pyrimidine nucleotide biosynthetic process photosystem II repair 'de novo' pyrimidine nucleobase biosynthetic process photosystem II assembly CMP phosphorylation UTP and CTP de novo biosynthesis nucleotide phosphorylation RNA methylation chloroplast thylakoid lumen pyrimidine ribonucleotides interconversion Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TreatCFM001177 | response to chitin protein phosphorylation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001220 | DNA methylation on cytosine within a CHH sequence cellular response to heat C-5 methylation of cytosine polyvinyl alcohol degradation N-methyltransferase activity DNA (cytosine-5-)-methyltransferase activity 16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity vitamin E biosynthetic process 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity Cysteine and methionine metabolism Ubiquinone and other terpenoid-quinone biosynthesis ajmaline and sarpagine biosynthesis vindoline and vinblastine biosynthesis chromatin binding | details |
| TreatCFM001699 | histone lysine methylation histone-lysine N-methyltransferase activity Transcription_related, Transcription regulator: SET formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001809 | Transcription_related, Transcription factor: NF-YA Antigen processing and presentation binding | details |
Expression profiles
 Show details about module gene expression profiling |