TreatCFM000266's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| outer membrane | 0.048480488 | GO:0019867 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000965 | AT5G63100 (4.00E-89) | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| CRO_T002644 | - | - |
| CRO_T003488 | - | - |
| CRO_T003793 | - | - |
| CRO_T004102 | - | - |
| CRO_T005006 | - | - |
| CRO_T006052 | - | - |
| CRO_T006257 | AT5G19620 (3.00E-87) | ATOEP80|OUTER ENVELOPE PROTEIN OF 80 KDA; EMB213|EMBRYO DEFECTIVE 213; TOC75-V|translocon at the outer envelope membrane of chloroplasts 75-V |
| CRO_T006710 | - | - |
| CRO_T006900 | AT2G35680 (7.00E-30) | Phosphotyrosine protein phosphatases superfamily protein |
| CRO_T007382 | - | - |
| CRO_T007522 | AT5G24300 (5.00E-11) | ATSS1|STARCH SYNTHASE 1 |
| CRO_T009361 | - | - |
| CRO_T015698 | - | - |
| CRO_T015915 | AT2G36835 (8.00E-14) | unknown protein |
| CRO_T015991 | AT5G58840 (1.00E-104) | Subtilase family protein |
| CRO_T016766 | - | - |
| CRO_T017794 | - | - |
| CRO_T017921 | - | - |
| CRO_T019129 | - | - |
| CRO_T021409 | - | - |
| CRO_T022552 | - | - |
| CRO_T030050 | - | - |
| CRO_T030761 | ATCG00430 (1.00E-21) | PSBG|photosystem II reaction center protein G |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000080 | negative regulation of protein kinase activity protein kinase inhibitor activity double-stranded RNA binding protein kinase binding | details |
| TreatCFM000089 | ABC transporters photosystem II reaction center | details |
| TreatCFM000094 | Transcription_related, Transcription regulator: MED6 D-myo-inositol (1,4,5)-trisphosphate degradation ethylene biosynthesis I (plants) L-methionine salvage cycle II (plants) | details |
| TreatCFM000132 | Glutathione metabolism | details |
| TreatCFM000156 | plastid organization redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 isoflavonoid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) | details |
| TreatCFM000170 | pyruvate fermentation to ethanol II ribonuclease inhibitor activity oxaloacetate decarboxylase activity 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity carboxy-lyase activity RNA methyltransferase activity thiamine pyrophosphate binding | details |
| TreatCFM000174 | details | |
| TreatCFM000371 | response to biotic stimulus defense response redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 L-aspartate biosynthesis L-aspartate degradation I superpathway of L-isoleucine biosynthesis I superpathway of L-threonine biosynthesis UDP-α-D-glucuronate biosynthesis (from UDP-glucose) UDP-D-xylose biosynthesis superpathway of aspartate and asparagine biosynthesis UDP-sugars interconversion regulation of protein serine/threonine phosphatase activity acetaldehyde biosynthesis I pyruvate fermentation to ethanol II alcohol dehydrogenase (NAD) activity UDP-glucose 6-dehydrogenase activity receptor activity L-aspartate:2-oxoglutarate aminotransferase activity S-(hydroxymethyl)glutathione dehydrogenase activity protein phosphatase inhibitor activity abscisic acid binding | details |
| TreatCFM000408 | Protein_kinases_phosphatases, PPC:5.1.1: Other Kinase Indole alkaloid biosynthesis BLOC-1 complex plastid nucleoid Transcription_related, Transcription factor: LOB phosphatidylinositol dephosphorylation fructose 6-phosphate metabolic process glycolytic process through fructose-6-phosphate response to light intensity Golgi vesicle budding phospholipid translocation ajmaline and sarpagine biosynthesis D-myo-inositol (1,4,5)-trisphosphate degradation glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) | details |
| TreatCFM000440 | isoflavonoid biosynthesis II benzoate biosynthesis I (CoA-dependent, β-oxidative) hydrogen-translocating pyrophosphatase activity inorganic diphosphatase activity transmembrane transport | details |
| TreatCFM000587 | Protein_kinases_phosphatases, PPC:1.17.1: Wall Associated Kinase cell surface receptor signaling pathway | details |
| TreatCFM000740 | calcium-dependent ATPase activity barrier septum site selection chloroplast fission protein homodimerization activity | details |
| TreatCFM000874 | Protein_kinases_phosphatases, PPC:1.17.1: Wall Associated Kinase redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 cell surface receptor signaling pathway | details |
| TreatCFM001177 | response to chitin protein phosphorylation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001181 | D-arabinono-1,4-lactone oxidase activity L-gulonolactone oxidase activity outer membrane benzoate biosynthesis I (CoA-dependent, β-oxidative) triacylglycerol degradation Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: GRAS flavin adenine dinucleotide binding | details |
| TreatCFM001220 | DNA methylation on cytosine within a CHH sequence cellular response to heat C-5 methylation of cytosine polyvinyl alcohol degradation N-methyltransferase activity DNA (cytosine-5-)-methyltransferase activity 16-methoxy-2,3-dihydro-3-hydroxytabersonine N-methyltransferase activity vitamin E biosynthetic process 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity Cysteine and methionine metabolism Ubiquinone and other terpenoid-quinone biosynthesis ajmaline and sarpagine biosynthesis vindoline and vinblastine biosynthesis chromatin binding | details |
| TreatCFM001290 | Protein_kinases_phosphatases, PPC:4.2.3: Calcium/Calmodulin Dependent Protein Kinase (CCamK) response to endoplasmic reticulum stress Plant-pathogen interaction | details |
| TreatCFM001330 | formation of glycosidic bonds, GlycosylTransferases: GTnc ribonuclease inhibitor activity triphosphatase activity oxaloacetate decarboxylase activity 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity regulation of RNA metabolic process protein targeting to ER response to light intensity plastid nucleoid signal recognition particle binding signal recognition particle, endoplasmic reticulum targeting Protein export regulation of gene expression negative regulation of catalytic activity root development | details |
| TreatCFM001463 | MAPK signaling pathway plastid nucleoid response to light intensity Transcription_related, Transcription factor: NAC regulation of gene expression | details |
| TreatCFM001464 | MAPK signaling pathway response to light intensity plastid nucleoid regulation of gene expression Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM001513 | MAPK signaling pathway D-myo-inositol (1,4,5)-trisphosphate degradation xylan biosynthesis plastid nucleoid exonuclease activity response to light intensity endonuclease activity cellulose synthase (UDP-forming) activity phosphatidylinositol dephosphorylation regulation of gene expression Transcription_related, Transcription factor: NAC cellulose biosynthetic process | details |
Expression profiles
 Show details about module gene expression profiling |