TreatCFM001471's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| carbohydrate transport | 0.016455283 | GO:0008643 |
| transporter activity | 0.020919262 | GO:0005215 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010061 | - | - |
| CRO_T011995 | AT1G21870 (4.00E-43) | GONST5|golgi nucleotide sugar transporter 5 |
| CRO_T015257 | - | - |
| CRO_T021837 | - | - |
| CRO_T023611 | - | - |
| CRO_T026920 | AT2G05760 (0) | Xanthine/uracil permease family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000026 | Ubiquitin_Proteasome_system, DUB: JAMM Proteasome carbohydrate transport proteasome-mediated ubiquitin-dependent protein catabolic process proteasome complex | details |
| TreatCFM000144 | carbohydrate transport | details |
| TreatCFM000154 | Transcription_related, Transcription factor: AP2 adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc phosphoprotein phosphatase activity transporter activity Protein processing in endoplasmic reticulum | details |
| TreatCFM000233 | Ubiquitin_Proteasome_system, DUB: JAMM cullin deneddylation COP9 signalosome carbohydrate transport | details |
| TreatCFM000349 | benzoyl-CoA biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: BES1 Transcription_related, Transcription regulator: LIM Ubiquitin_Proteasome_system, DUB: JAMM glycoprotein 2-beta-D-xylosyltransferase activity fatty acid β-oxidation II (peroxisome) transcription factor activity, sequence-specific DNA binding transcription regulatory region DNA binding benzoate biosynthesis I (CoA-dependent, β-oxidative) protein N-linked glycosylation formation of translation preinitiation complex regulation of transcription, DNA-templated carbohydrate transport regulation of translational initiation brassinosteroid mediated signaling pathway | details |
| TreatCFM000390 | Ubiquitin_Proteasome_system, DUB: JAMM L-phenylalanine biosynthesis II L-phenylalanine biosynthesis III (cytosolic, plants) prephenate dehydratase activity arogenate dehydratase activity L-phenylalanine biosynthetic process oxalate metabolic process oxalate decarboxylase activity nutrient reservoir activity manganese ion binding carbohydrate transport amino acid binding proteasome-mediated ubiquitin-dependent protein catabolic process Proteasome Biosynthesis of amino acids | details |
| TreatCFM000414 | carbohydrate transport | details |
| TreatCFM000472 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K defense response, incompatible interaction endomembrane system organization xyloglucan biosynthetic process activation of MAPK activity fucose biosynthetic process MAP kinase kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc MAP kinase activity integral component of Golgi membrane salicylic acid mediated signaling pathway unidimensional cell growth aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis MAPK cascade MAPK signaling pathway - plant transferase activity, transferring glycosyl groups | details |
| TreatCFM000520 | Ubiquitin_Proteasome_system, E3 adaptor: DWD carbohydrate transport | details |
| TreatCFM000722 | carbohydrate transport binding | details |
| TreatCFM000723 | UFM1 hydrolase activity Protein_kinases_phosphatases, PPC:1.6.3: Receptor Like Cytoplasmic Kinase V Pentose and glucuronate interconversions non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 pectate lyase activity MAP kinase kinase kinase activity aminopeptidase activity manganese ion binding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc activation of MAPKK activity pectin catabolic process MAPK cascade | details |
| TreatCFM000737 | endomembrane system organization xyloglucan biosynthetic process fucose biosynthetic process megagametogenesis integral component of Golgi membrane salicylic acid mediated signaling pathway Ribosome biogenesis in eukaryotes transferase activity, transferring glycosyl groups unidimensional cell growth formation of glycosidic bonds, GlycosylTransferases: GTnc rRNA processing aerobic respiration I (cytochrome c) aerobic respiration III (alternative oxidase pathway) glycolysis I (from glucose 6-phosphate) NAD/NADH phosphorylation and dephosphorylation xyloglucan biosynthesis | details |
| TreatCFM000764 | Protein_kinases_phosphatases, PPC:4.1.4: MAP2K activation of MAPK activity defense response, incompatible interaction MAP kinase kinase activity | details |
| TreatCFM000777 | carbohydrate transport mitochondrion integral component of membrane | details |
| TreatCFM000803 | Ubiquitin_Proteasome_system, DUB: JAMM carbohydrate transport formation of translation preinitiation complex translation initiation factor activity eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic 43S preinitiation complex RNA transport | details |
| TreatCFM000829 | Ubiquitin_Proteasome_system, DUB: JAMM cullin deneddylation COP9 signalosome carbohydrate transport | details |
| TreatCFM001093 | transcription from RNA polymerase III promoter carbohydrate transport DNA-directed RNA polymerase III complex ribonucleoside binding RNA polymerase III activity RNA degradation Purine metabolism | details |
| TreatCFM001106 | nitrogen compound metabolic process organic substance metabolic process carbohydrate transport primary metabolic process cellular metabolic process binding | details |
| TreatCFM001221 | Ubiquitin_Proteasome_system, DUB: JAMM cullin deneddylation COP9 signalosome carbohydrate transport | details |
| TreatCFM001293 | Transcription_related, Transcription regulator: LIM Ubiquitin_Proteasome_system, E3 adaptor: Cullin cullin-RING ubiquitin ligase complex Sphingolipid metabolism carbohydrate transport protein ubiquitination involved in ubiquitin-dependent protein catabolic process ubiquitin protein ligase binding ubiquitin protein ligase activity | details |
| TreatCFM001298 | 3R-hydroxyacyl-CoA dehydratase activity fatty acid beta-oxidation, unsaturated, even number Transcription_related, Transcription regulator: LIM carbohydrate transport arachidonate biosynthesis IV (8-detaturase, lower eukaryotes) unsaturated, even numbered fatty acid β-oxidation very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II Peroxisome | details |
| TreatCFM001346 | Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase redox enzymes that act in conjunction with CAZymes, Auxiliary Activities: AA7 rRNA (uridine-N3-)-methyltransferase activity rRNA base methylation lignin catabolic process lignin biosynthetic process peptidyl-serine phosphorylation | details |
| TreatCFM001445 | carbohydrate transport | details |
| TreatCFM001491 | lipid transporter activity plasmodesma Hedgehog signaling pathway lipid transport Lysosome adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII Ubiquitin_Proteasome_system, E3 adaptor: BTB transporter activity | details |
| TreatCFM001550 | carbohydrate transport | details |
| TreatCFM001632 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc aminopeptidase activity manganese ion binding Protein processing in endoplasmic reticulum | details |
Expression profiles
 Show details about module gene expression profiling |