TreatCFM001974's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| fatty acid biosynthesis (plant mitochondria) | 0.001595745 | plantCyc |
| anthocyanidin modification (Arabidopsis) | 0.003454893 | plantCyc |
| ubiquitin-protein transferase activator activity | 0.01348892 | GO:0097027 |
| anaphase-promoting complex binding | 0.01348892 | GO:0010997 |
| Fatty acid metabolism | 0.024570135 | KEGG pathway |
| Ubiquitin mediated proteolysis | 0.024570135 | KEGG pathway |
| flavonoid biosynthetic process | 0.03540346 | GO:0009813 |
| flavonoid glucuronidation | 0.03540346 | GO:0052696 |
| regulation of catalytic activity | 0.03540346 | GO:0050790 |
| fatty acid biosynthetic process | 0.03540346 | GO:0006633 |
| cell division | 0.03540346 | GO:0051301 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007440 | AT1G02860 (7.00E-04) | BAH1|BENZOIC ACID HYPERSENSITIVE 1; NLA|nitrogen limitation adaptation |
| CRO_T023125 | AT5G54010 (2.00E-133) | UDP-Glycosyltransferase superfamily protein |
| CRO_T023722 | AT2G40600 (4.00E-38) | appr-1-p processing enzyme family protein |
| CRO_T023842 | AT1G61210 (8.00E-15) | DWA3|DWD hypersensitive to ABA 3 |
| CRO_T026983 | AT5G54580 (2.00E-19) | RNA-binding (RRM/RBD/RNP motifs) family protein |
| CRO_T032403 | AT2G04540 (0) | Beta-ketoacyl synthase |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000028 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds vacuolar proton-transporting V-type ATPase complex assembly nitrogen compound metabolic process retrograde transport, endosome to Golgi endoplasmic reticulum-Golgi intermediate compartment membrane | details |
| TreatCFM000533 | PI3K-Akt signaling pathway Transcription_related, Transcription factor: CAMTA TORC1 complex TOR signaling organophosphate ester transport organic phosphonate transport transmembrane transport plasma membrane | details |
| TreatCFM000637 | Amyotrophic lateral sclerosis (ALS) mitochondrial outer membrane translocase complex protein import into mitochondrial matrix vacuolar transport NLS-bearing protein import into nucleus base-excision repair DNA N-glycosylase activity nucleoplasm nuclear pore Base excision repair Lysosome regulation of catalytic activity nuclear localization sequence binding protein channel activity cysteine-type endopeptidase activity protein transporter activity Endocytosis | details |
| TreatCFM001272 | phosphatidylethanolamine biosynthesis II ethanolamine-phosphate cytidylyltransferase activity peptide metabolic process Noc complex integral component of mitochondrial outer membrane nuclear lumen | details |
| TreatCFM001310 | L-cysteine biosynthesis I transmembrane transport cysteine biosynthetic process from serine organophosphate ester transport organic phosphonate transport Ascorbate and aldarate metabolism cytoplasm plasma membrane cellular amino acid biosynthetic process monodehydroascorbate reductase (NADH) activity organic phosphonate transmembrane-transporting ATPase activity cysteine synthase activity cell redox homeostasis | details |
| TreatCFM001325 | Endocytosis clathrin adaptor complex vesicle-mediated transport embryo development ending in seed dormancy pollen development intracellular protein transport | details |
| TreatCFM001801 | positive regulation of transport RNA binding protein binding involved in protein folding Ribosome biogenesis in eukaryotes tRNA processing rRNA processing unfolded protein binding | details |
| TreatCFM001941 | transcription factor TFIIE complex Basal transcription factors transcription initiation from RNA polymerase II promoter translational initiation | details |
| TreatCFM002029 | Transcription_related, Transcription regulator: TRAF Ubiquitin_Proteasome_system, E3 adaptor: BTB Plant hormone signal transduction Spliceosome | details |
| TreatCFM002076 | eukaryotic translation initiation factor 2B complex SCF ubiquitin ligase complex proteasome complex S-methyl-5-thioribose-1-phosphate isomerase activity myosin heavy chain kinase activity guanyl-nucleotide exchange factor activity simple leaf morphogenesis regulation of auxin mediated signaling pathway L-methionine biosynthetic process from methylthioadenosine SCF-dependent proteasomal ubiquitin-dependent protein catabolic process leaf vascular tissue pattern formation Fanconi anemia pathway Proteasome regulation of translational initiation positive regulation of GTPase activity translational initiation RNA transport translation initiation factor activity 2-alkenal reductase [NAD(P)] activity | details |
| TreatCFM002115 | 2-alkenal reductase [NAD(P)] activity anthocyanidin modification (Arabidopsis) proteasome complex Proteasome Transcription_related, Transcription factor: bZIP Transcription_related, Transcription factor: C2H2 | details |
| TreatCFM002128 | anthocyanidin modification (Arabidopsis) Herpes simplex infection Fanconi anemia pathway ether hydrolase activity myosin heavy chain kinase activity | details |
Expression profiles
 Show details about module gene expression profiling |