CFinderM001854's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     

Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
HSF Transcription_Regulator(from PlantTFDB)0.01196125GFam
fatty-acyl-CoA binding,0.036719573GO:0000062

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000044G1970acyl-CoA binding protein 2AT4G27780 (2.70E-94)
PH01000092G1660Xanthine/uracil permease family proteinAT5G62890 (0.00E+00)
PH01000283G0370Galactose oxidase/kelch repeat superfamily proteinAT1G30090 (1.00E-132)
PH01000317G0880SET domain-containing proteinAT3G56570 (1.20E-38)
PH01001018G0530winged-helix DNA-binding transcription factor family proteinAT4G13980 (2.00E-89)
PH01001022G0480mechanosensitive channel of small conductance-like 10AT5G12080 (1.00E-115)
PH01002019G0160Ribosomal protein L19 family proteinAT4G11630 (4.20E-51)
PH01002392G0140Target of Myb protein 1AT1G21380 (4.00E-114)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000006CAMK_CDPK (from iTAK)
transporter activity,
transport,
transmembrane transport,
polygalacturonase activity,
details
CFinderM000133C2H2 Transcription_Regulator(from PlantTFDB)
RWP-RK Transcription_Regulator(from iTAK)
Nin-like Transcription_Regulator(from PlantTFDB)
carbohydrate phosphorylation,
details
CFinderM000238Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
Phagosome
Ribosome_biogenesis_in_eukaryotes
details
CFinderM000573fatty-acyl-CoA binding,
Others Transcription_Regulator(from iTAK)
signal transduction,
details
CFinderM000724HSF Transcription_Regulator(from PlantTFDB)
metabolic process,
sterol_24-C-methyltransferase_activity
Steroid_biosynthesis
protein kinase C-activating G-protein coupled receptor signaling pathway,
steroid biosynthetic process,
diacylglycerol kinase activity,
NAD+ kinase activity,
details
CFinderM000953fatty-acyl-CoA binding,
details
CFinderM000986CMGC_MAPK (from iTAK)
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
details
CFinderM001059Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
3-dehydroquinate synthase activity,
SNARE_interactions_in_vesicular_transport
Golgi vesicle transport,
aromatic amino acid family biosynthetic process,
phosphatidylinositol metabolic process,
RNA_degradation
details
CFinderM001060response to hormone stimulus,
RLK-Pelle_URK-1 (from iTAK)
galactose metabolic process,
nucleus,
UDP-glucose 4-epimerase activity,
protein dimerization activity,
details
CFinderM001062HSF Transcription_Regulator(from PlantTFDB)
NAD+ kinase activity,
diacylglycerol kinase activity,
protein kinase C-activating G-protein coupled receptor signaling pathway,
details
CFinderM001134Lysine_biosynthesis
regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
spliceosomal complex,
Ribosome
details
CFinderM001166DNA_replication
Nucleotide_excision_repair
Mismatch_repair
Riboflavin_metabolism
histone acetylation,
chromatin modification,
chromatin silencing at telomere,
details
CFinderM001441arsenite_transport
arsenite transmembrane transporter activity,
details
CFinderM001471regulation of translational initiation,
eukaryotic translation initiation factor 3 complex,
WRKY Transcription_Regulator(from PlantTFDB)
details
CFinderM001597Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
C3H Transcription_Regulator(from PlantTFDB)
membrane,
details
CFinderM001610Sphingolipid_metabolism
alpha-Linolenic_acid_metabolism
carboxylic acid metabolic process,
catalytic activity,
carboxy-lyase activity,
details
CFinderM001630GTnc GlycosylTransferases
HSF Transcription_Regulator(from PlantTFDB)
details
CFinderM001632translation,
Ribosome
structural constituent of ribosome,
intracellular,
Ribosome
HSF Transcription_Regulator(from PlantTFDB)
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
large ribosomal subunit,
details
CFinderM001655transport,
transmembrane transport,
regulation_of_cell_cycle
transporter activity,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
details
CFinderM001658Phosphatidylinositol_signaling_system
Inositol_phosphate_metabolism
phosphatidylinositol metabolic process,
phosphatidylinositol phosphate kinase activity,
Phagosome
cellular protein metabolic process,
TKL-Pl-6 (from iTAK)
details
CFinderM001683Steroid_biosynthesis
RLK-Pelle_WAK_LRK10L-1 (from iTAK)
TKL-Pl-6 (from iTAK)
sterol_24-C-methyltransferase_activity
protein serine/threonine kinase activity,
protein phosphorylation,
steroid biosynthetic process,
single-stranded DNA binding,
protein kinase activity,
transferase activity, transferring phosphorus-containing groups,
TKL-Pl-4 (from iTAK)
GARP-G2-like Transcription_Regulator(from iTAK)
G2-like Transcription_Regulator(from PlantTFDB)
details
CFinderM001701peroxisome_fission
integral_component_of_peroxisomal_membrane
RNA_transport
details
CFinderM001703Endocytosis
regulation of ARF GTPase activity,
ARF GTPase activator activity,
details
CFinderM001735TALE Transcription_Regulator(from PlantTFDB)
HB-BELL Transcription_Regulator(from iTAK)
details
CFinderM001753Endocytosis
HSF Transcription_Regulator(from PlantTFDB)
single-stranded DNA binding,
details
CFinderM001756Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
Lipoic_acid_metabolism
HB-BELL Transcription_Regulator(from iTAK)
TALE Transcription_Regulator(from PlantTFDB)
aromatic amino acid family biosynthetic process,
lipoate biosynthetic process,
lipoate synthase activity,
3-dehydroquinate synthase activity,
details
CFinderM001809Lipoic_acid_metabolism
TKL-Pl-6 (from iTAK)
chloroplast,
lipoate biosynthetic process,
lipoate synthase activity,
details
CFinderM001818C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details
CFinderM001878isoprenoid biosynthetic process,
mRNA_surveillance_pathway
C2H2 Transcription_Regulator(from PlantTFDB)
fatty-acyl-CoA binding,
details

4.Expression profilings